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BMCBI
2010
138views more  BMCBI 2010»
15 years 5 months ago
Sigma-2: Multiple sequence alignment of non-coding DNA via an evolutionary model
Background: While most multiple sequence alignment programs expect that all or most of their input is known to be homologous, and penalise insertions and deletions, this is not a ...
Gayathri Jayaraman, Rahul Siddharthan
BMCBI
2008
78views more  BMCBI 2008»
15 years 5 months ago
A new protein linear motif benchmark for multiple sequence alignment software
Background: Linear motifs (LMs) are abundant short regulatory sites used for modulating the functions of many eukaryotic proteins. They play important roles in post-translational ...
Emmanuel Perrodou, Claudia Chica, Olivier Poch, To...
TPHOL
1997
IEEE
15 years 9 months ago
An Isabelle-Based Theorem Prover for VDM-SL
This note lists references which address –in some way or another– the problems relating to formal manipulation of logical expressions where terms can fail to denote. Reference...
Sten Agerholm, Jacob Frost
PPOPP
2009
ACM
16 years 5 months ago
Safe open-nested transactions through ownership
Researchers in transactional memory (TM) have proposed open nesting as a methodology for increasing the concurrency of transactional programs. The idea is to ignore "low-leve...
Kunal Agrawal, I.-Ting Angelina Lee, Jim Sukha
APCSAC
2007
IEEE
15 years 11 months ago
Runtime Performance Projection Model for Dynamic Power Management
In this paper, a runtime performance projection model for dynamic power management is proposed. The model is built as a first-order linear equation using a linear regression model....
Sang Jeong Lee, Hae-Kag Lee, Pen-Chung Yew
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