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BMCBI
2007
143views more  BMCBI 2007»
15 years 5 months ago
RNAspa: a shortest path approach for comparative prediction of the secondary structure of ncRNA molecules
Background: In recent years, RNA molecules that are not translated into proteins (ncRNAs) have drawn a great deal of attention, as they were shown to be involved in many cellular ...
Yair Horesh, Tirza Doniger, Shulamit Michaeli, Ron...
SG
2005
Springer
15 years 10 months ago
Multi-level Interaction in Parametric Design
Parametric design systems model a design as a constrained collection of schemata. Designers work in such systems at two levels: definition of schemata and constraints; and search w...
Robert Aish, Robert Woodbury
CSB
2005
IEEE
114views Bioinformatics» more  CSB 2005»
15 years 10 months ago
Tree Decomposition Based Fast Search of RNA Structures Including Pseudoknots in Genomes
Searching genomes for RNA secondary structure with computational methods has become an important approach to the annotation of non-coding RNAs. However, due to the lack of effici...
Yinglei Song, Chunmei Liu, Russell L. Malmberg, Fa...
DAC
2003
ACM
16 years 5 months ago
Data communication estimation and reduction for reconfigurable systems
Widespread adoption of reconfigurable devices requires system level synthesis techniques to take an application written in a high level language and map it to the reconfigurable d...
Adam Kaplan, Philip Brisk, Ryan Kastner
SIAMSC
2010
116views more  SIAMSC 2010»
15 years 3 months ago
Recursively Accelerated Multilevel Aggregation for Markov Chains
A recursive acceleration method is proposed for multiplicative multilevel aggregation algorithms that calculate the stationary probability vector of large, sparse, and irreducible ...
Hans De Sterck, K. Miller, G. Sanders, M. Winlaw