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» Constraint Programming in Structural Bioinformatics
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BIRD
2007
Springer
120views Bioinformatics» more  BIRD 2007»
15 years 3 months ago
Joining Softassign and Dynamic Programming for the Contact Map Overlap Problem
Comparison of 3-dimensional protein folds is a core problem in molecular biology. The Contact Map Overlap (CMO) scheme provides one of the most common measures for protein structur...
Brijnesh J. Jain, Michael Lappe
AGP
2010
IEEE
15 years 2 months ago
Constraint Logic Programming
Constraint Logic Programming (CLP) is one of the most successful branches of Logic Programming; it attracts the interest of theoreticians and practitioners, and it is currently use...
Marco Gavanelli, Francesca Rossi
80
Voted
CSCLP
2004
Springer
15 years 2 months ago
A Note on Bilattices and Open Constraint Programming
Abstract. We propose to use bilattice as a constraint valuation structure in order to represent truth and belief at the same time. A bilattice is a set which owns two lattices orde...
Arnaud Lallouet
BIBE
2008
IEEE
111views Bioinformatics» more  BIBE 2008»
14 years 11 months ago
Structure learning for biomolecular pathways containing cycles
Bayesian network structure learning is a useful tool for elucidation of regulatory structures of biomolecular pathways. The approach however is limited by its acyclicity constraint...
S. Itani, Karen Sachs, Garry P. Nolan, M. A. Dahle...
81
Voted
AAAI
2007
14 years 12 months ago
Data Structures for Generalised Arc Consistency for Extensional Constraints
Extensional (table) constraints are an important tool for attacking combinatorial problems with constraint programming. Recently there has been renewed interest in fast propagatio...
Ian P. Gent, Christopher Jefferson, Ian Miguel, Pe...