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BMCBI
2006
146views more  BMCBI 2006»
15 years 2 months ago
GeneTools - application for functional annotation and statistical hypothesis testing
Background: Modern biology has shifted from "one gene" approaches to methods for genomic-scale analysis like microarray technology, which allow simultaneous measurement ...
Vidar Beisvag, Frode K. R. Jünge, Hallgeir Be...
BMCBI
2010
143views more  BMCBI 2010»
15 years 2 months ago
ETE: a python Environment for Tree Exploration
Background: Many bioinformatics analyses, ranging from gene clustering to phylogenetics, produce hierarchical trees as their main result. These are used to represent the relations...
Jaime Huerta-Cepas, Joaquín Dopazo, Toni Ga...
HPDC
2010
IEEE
15 years 3 months ago
Scalability of communicators and groups in MPI
As the number of cores inside compute clusters continues to grow, the scalability of MPI (Message Passing Interface) is important to ensure that programs can continue to execute o...
Humaira Kamal, Seyed M. Mirtaheri, Alan Wagner
JSSPP
2010
Springer
15 years 11 days ago
Dynamic Proportional Share Scheduling in Hadoop
We present the Dynamic Priority (DP) parallel task scheduler for Hadoop. It allows users to control their allocated capacity by adjusting their spending over time. This simple mech...
Thomas Sandholm, Kevin Lai
ESCIENCE
2006
IEEE
15 years 8 months ago
Characterization of Computational Grid Resources Using Low-Level Benchmarks
An important factor that needs to be taken into account by end-users and systems (schedulers, resource brokers, policy brokers) when mapping applications to the Grid, is the perfo...
George Tsouloupas, Marios D. Dikaiakos