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SPIRE
2009
Springer
15 years 10 months ago
On Entropy-Compressed Text Indexing in External Memory
A new trend in the field of pattern matching is to design indexing data structures which take space very close to that required by the indexed text (in entropy-compressed form) an...
Wing-Kai Hon, Rahul Shah, Sharma V. Thankachan, Je...
132
Voted
BMCBI
2007
89views more  BMCBI 2007»
15 years 3 months ago
Comparing segmentations by applying randomization techniques
Background: There exist many segmentation techniques for genomic sequences, and the segmentations can also be based on many different biological features. We show how to evaluate ...
Niina Haiminen, Heikki Mannila, Evimaria Terzi
141
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OOPSLA
2010
Springer
15 years 2 months ago
Ownership and immutability in generic Java
The Java language lacks the important notions of ownership (an object owns its representation to prevent unwanted aliasing) and immutability (the division into mutable, immutable,...
Yoav Zibin, Alex Potanin, Paley Li, Mahmood Ali, M...
BMCBI
2011
14 years 7 months ago
Cell Subset Prediction for Blood Genomic Studies
Background: Genome-wide transcriptional profiling of patient blood samples offers a powerful tool to investigate underlying disease mechanisms and personalized treatment decisions...
Christopher R. Bolen, Mohamed Uduman, Steven H. Kl...
130
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CVPR
2008
IEEE
16 years 5 months ago
Sparsity, redundancy and optimal image support towards knowledge-based segmentation
In this paper, we propose a novel approach to model shape variations. It encodes sparsity, exploits geometric redundancy, and accounts for the different degrees of local variation...
Salma Essafi, Georg Langs, Nikos Paragios
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