Background: In general, the construction of trees is based on sequence alignments. This procedure, however, leads to loss of informationwhen parts of sequence alignments (for inst...
Gilles Didier, Laurent Debomy, Maude Pupin, Ming Z...
A novel system, called the oscillator system, consisting of order of p 3 functions (signals) on the finite field p; with p an odd prime, is described and studied. The new functions...
: A sequence of increasing translation invariant subspaces can be defined by the Haar-system (or generally by wavelets). The orthogonal projection to the subspaces generates a deco...
We present a lossless compression algorithm, GenCompress, for genetic sequences, based on searching for approximate repeats. Our algorithm achieves the best compression ratios for...
Phylogenetic trees are commonly reconstructed based on hard optimization problems such as Maximum parsimony (MP) and Maximum likelihood (ML). Conventional MP heuristics for produc...
Anupam Bhattacharjee, Kazi Zakia Sultana, Zalia Sh...