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    » Construction and Applications of CRT Sequences
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    IJCAI
    2007
    166views Artificial Intelligence» more  IJCAI 2007»
    Incremental Construction of Structured Hidden Markov Models
    14 years 11 months ago
    Incremental Construction of Structured Hidden Markov Models
    Download  www.ijcai.org
    This paper presents an algorithm for inferring a Structured Hidden Markov Model (S-HMM) from a set of sequences. The S-HMMs are a sub-class of the Hierarchical Hidden Markov Model...
    Ugo Galassi, Attilio Giordana, Lorenza Saitta
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    BMCBI
    2007
    135views more  BMCBI 2007»
    RECOVIR: An application package to automatically identify some single stranded RNA viruses using capsid protein residues that un
    14 years 9 months ago
    RECOVIR: An application package to automatically identify some single stranded RNA viruses using capsid protein residues that un
    Download  www.biomedcentral.com
    Background: Most single stranded RNA (ssRNA) viruses mutate rapidly to generate large number of strains having highly divergent capsid sequences. Accurate strain recognition in un...
    Dianhui Zhu, George E. Fox, Sugoto Chakravarty
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    BMCBI
    2008
    104views more  BMCBI 2008»
    ReRep: Computational detection of repetitive sequences in genome survey sequences (GSS)
    14 years 9 months ago
    ReRep: Computational detection of repetitive sequences in genome survey sequences (GSS)
    Download  www.biomedcentral.com
    Background: Genome survey sequences (GSS) offer a preliminary global view of a genome since, unlike ESTs, they cover coding as well as non-coding DNA and include repetitive region...
    Thomas D. Otto, Leonardo H. F. Gomes, Marcelo Alve...
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    CPM
    2006
    Springer
    175views Combinatorics» more  CPM 2006»
    On-Line Linear-Time Construction of Word Suffix Trees
    15 years 1 months ago
    On-Line Linear-Time Construction of Word Suffix Trees
    Download  www.i.kyushu-u.ac.jp
    Abstract. Suffix trees are the key data structure for text string matching, and are used in wide application areas such as bioinformatics and data compression. Sparse suffix trees ...
    Shunsuke Inenaga, Masayuki Takeda
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    TCAD
    2002
    110views more  TCAD 2002»
    A constructive genetic algorithm for gate matrix layout problems
    14 years 9 months ago
    A constructive genetic algorithm for gate matrix layout problems
    Download  www.lac.inpe.br
    This paper describes an application of a Constructive Genetic Algorithm (CGA) to the Gate Matrix Layout Problem (GMLP). The GMLP happens in very large scale integration (VLSI) desi...
    Alexandre César Muniz de Oliveira, Luiz Ant...
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