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140
Voted
NAR
2011
172views Computer Vision» more  NAR 2011»
14 years 4 months ago
NGSmethDB: a database for next-generation sequencing single-cytosine-resolution DNA methylation data
Next-generation sequencing (NGS) together with bisulphite conversion allows the generation of whole genome methylation maps at single-cytosine resolution. This allows studying the...
Michael Hackenberg, Guillermo Barturen, José...
NAR
2011
186views Computer Vision» more  NAR 2011»
14 years 4 months ago
TcoF-DB: dragon database for human transcription co-factors and transcription factor interacting proteins
The initiation and regulation of transcription in eukaryotes is complex and involves a large number of transcription factors (TFs), which are known to bind to the regulatory regio...
Ulf Schaefer, Sebastian Schmeier, Vladimir B. Baji...
115
Voted
ISBI
2004
IEEE
16 years 2 months ago
Fast Multiresolution Photon-Limited Image Reconstruction
The techniques described in this paper allow multiscale photon-limited image reconstruction methods to be implemented with significantly less computational complexity than previou...
Rebecca Willett, Robert Nowak
RECOMB
2008
Springer
16 years 2 months ago
BayCis: A Bayesian Hierarchical HMM for Cis-Regulatory Module Decoding in Metazoan Genomes
The transcriptional regulatory sequences in metazoan genomes often consist of multiple cis-regulatory modules (CRMs). Each CRM contains locally enriched occurrences of binding site...
Tien-ho Lin, Pradipta Ray, Geir Kjetil Sandve, Sel...
117
Voted
ICCAD
2003
IEEE
117views Hardware» more  ICCAD 2003»
15 years 10 months ago
On Whitespace and Stability in Mixed-Size Placement and Physical Synthesis
In the context of physical synthesis, large-scale standard-cell placement algorithms must facilitate incremental changes to layout, both local and global. In particular, flexible...
Saurabh N. Adya, Igor L. Markov, Paul Villarrubia