309 search results - page 32 / 62 » Contextual alignment of biological sequences |
108
Voted
RECOMB
2006
Springer
16 years 25 days ago
2006
Springer
In this paper, we address the problem of discovering novel non-coding RNA (ncRNA) using primary sequence, and secondary structure conservation, focusing on ncRNA families with pseu...
RECOMB
2005
Springer
16 years 25 days ago
2005
Springer
The multiple species de novo gene prediction problem can be stated as follows: given an alignment of genomic sequences from two or more organisms, predict the location and structur...
102
Voted
TCBB
2008
15 years 13 days ago
2008
Abstract-- The trans-genomic query (TGQ) problem -- enabling the free query of biological information, even across genomes -- is a central challenge facing bioinformatics. Solution...
108
Voted
BMCBI
2007
15 years 19 days ago
2007
Background: Remote homology detection is a challenging problem in Bioinformatics. Arguably, profile Hidden Markov Models (pHMMs) are one of the most successful approaches in addre...
101
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SIGMOD
2004
ACM
16 years 20 days ago
2004
ACM
Growing interest in genomic research has resulted in the creation of huge biological sequence databases. In this paper, we present a hash-based pier model for efficient homology s...