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» Continuous optimization methods for structure alignments
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ISAAC
2004
Springer
125views Algorithms» more  ISAAC 2004»
15 years 5 months ago
Local Gapped Subforest Alignment and Its Application in Finding RNA Structural Motifs
RNA molecules whose secondary structures contain similar substructures often have similar functions. Therefore, an important task in the study of RNA is to develop methods for disc...
Jesper Jansson, Ngo Trung Hieu, Wing-Kin Sung
RECOMB
1998
Springer
15 years 3 months ago
A polyhedral approach to RNA sequence structure alignment
Ribonucleic acid (RNA) is a polymer composed of four bases denoted A, C, G, and U. It is a generally single-stranded molecule where the bases form hydrogen bonds within the same m...
Hans-Peter Lenhof, Knut Reinert, Martin Vingron
COMPLIFE
2005
Springer
15 years 5 months ago
Protein Annotation by Secondary Structure Based Alignments (PASSTA)
Abstract. Most software tools in homology recognition on proteins answer only a few specific questions, often leaving not much room for the interpretation of the results. We devel...
Constantin Bannert, Jens Stoye
HPCC
2007
Springer
15 years 5 months ago
CDACAN: A Scalable Structured P2P Network Based on Continuous Discrete Approach and CAN
Abstract. CAN is a famous structured peer-to-peer network based on ddimensional torus topology with constant degree and logarithmical diameter, but suffers from poor scalability wh...
Lingwei Li, Qunwei Xue, Deke Guo
EOR
2008
156views more  EOR 2008»
14 years 11 months ago
Ant colony optimization for continuous domains
In this paper we present an extension of ant colony optimization (ACO) to continuous domains. We show how ACO, which was initially developed to be a metaheuristic for combinatoria...
Krzysztof Socha, Marco Dorigo