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113
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BMCBI
2007
144views more  BMCBI 2007»
14 years 10 months ago
Accelerated search for biomolecular network models to interpret high-throughput experimental data
Background: The functions of human cells are carried out by biomolecular networks, which include proteins, genes, and regulatory sites within DNA that encode and control protein e...
Suman Datta, Bahrad A. Sokhansanj
104
Voted
KAIS
2008
221views more  KAIS 2008»
14 years 10 months ago
Forecasting skewed biased stochastic ozone days: analyses, solutions and beyond
Much work on skewed, stochastic, high dimensional, and biased datasets usually implicitly solve each problem separately. Recently, we have been approached by Texas Commission on En...
Kun Zhang, Wei Fan
95
Voted
BMCBI
2005
106views more  BMCBI 2005»
14 years 10 months ago
A multistep bioinformatic approach detects putative regulatory elements in gene promoters
Background: Searching for approximate patterns in large promoter sequences frequently produces an exceedingly high numbers of results. Our aim was to exploit biological knowledge ...
Stefania Bortoluzzi, Alessandro Coppe, Andrea Biso...
106
Voted
BMCBI
2005
178views more  BMCBI 2005»
14 years 10 months ago
A quantization method based on threshold optimization for microarray short time series
Background: Reconstructing regulatory networks from gene expression profiles is a challenging problem of functional genomics. In microarray studies the number of samples is often ...
Barbara Di Camillo, Fatima Sanchez-Cabo, Gianna To...
78
Voted
SODA
2012
ACM
177views Algorithms» more  SODA 2012»
13 years 20 days ago
Stochastic coalescence in logarithmic time
The following distributed coalescence protocol was introduced by Dahlia Malkhi in 2006 motivated by applications in social networking. Initially there are n agents wishing to coal...
Po-Shen Loh, Eyal Lubetzky