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    BMCBI
    2008
    170views more  BMCBI 2008»
    Evaluation of GO-based functional similarity measures using S. cerevisiae protein interaction and expression profile data
    15 years 28 days ago
    Evaluation of GO-based functional similarity measures using S. cerevisiae protein interaction and expression profile data
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    Background: Researchers interested in analysing the expression patterns of functionally related genes usually hope to improve the accuracy of their results beyond the boundaries o...
    Tao Xu, LinFang Du, Yan Zhou
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    93
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    BMCBI
    2006
    119views more  BMCBI 2006»
    Utilization of two sample t-test statistics from redundant probe sets to evaluate different probe set algorithms in GeneChip stu
    15 years 26 days ago
    Utilization of two sample t-test statistics from redundant probe sets to evaluate different probe set algorithms in GeneChip stu
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    Background: The choice of probe set algorithms for expression summary in a GeneChip study has a great impact on subsequent gene expression data analysis. Spiked-in cRNAs with know...
    Zihua Hu, Gail R. Willsky
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    127
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    BMCBI
    2006
    213views more  BMCBI 2006»
    CoXpress: differential co-expression in gene expression data
    15 years 26 days ago
    CoXpress: differential co-expression in gene expression data
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    Background: Traditional methods of analysing gene expression data often include a statistical test to find differentially expressed genes, or use of a clustering algorithm to find...
    Michael Watson
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    88
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    BMCBI
    2007
    141views more  BMCBI 2007»
    On the origin and evolution of biosynthetic pathways: integrating microarray data with structure and organization of the Common
    15 years 25 days ago
    On the origin and evolution of biosynthetic pathways: integrating microarray data with structure and organization of the Common
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    Background: The lysine, threonine, and methionine biosynthetic pathways share the three initial enzymatic steps, which are referred to as the Common Pathway (CP). In Escherichia c...
    Marco Fondi, Matteo Brilli, Renato Fani
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    107
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    BMCBI
    2004
    114views more  BMCBI 2004»
    Profiled support vector machines for antisense oligonucleotide efficacy prediction
    15 years 21 days ago
    Profiled support vector machines for antisense oligonucleotide efficacy prediction
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    Background: This paper presents the use of Support Vector Machines (SVMs) for prediction and analysis of antisense oligonucleotide (AO) efficacy. The collected database comprises ...
    Gustavo Camps-Valls, Alistair M. Chalk, Antonio J....
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