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» Cosparse analysis modeling - uniqueness and algorithms
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WABI
2009
Springer
117views Bioinformatics» more  WABI 2009»
15 years 10 months ago
A Simulation Study Comparing Supertree and Combined Analysis Methods Using SMIDGen
Background: Supertree methods comprise one approach to reconstructing large molecular phylogenies given multi-marker datasets: trees are estimated on each marker and then combined...
M. Shel Swenson, François Barbançon,...
CSB
2005
IEEE
146views Bioinformatics» more  CSB 2005»
15 years 9 months ago
Multi-Metric and Multi-Substructure Biclustering Analysis for Gene Expression Data
A good number of biclustering algorithms have been proposed for grouping gene expression data. Many of them have adopted matrix norms to define the similarity score of a bicluste...
Sun-Yuan Kung, Man-Wai Mak, Ilias Tagkopoulos
PLDI
2012
ACM
13 years 6 months ago
Diderot: a parallel DSL for image analysis and visualization
Research scientists and medical professionals use imaging technology, such as computed tomography (CT) and magnetic resonance imaging (MRI) to measure a wide variety of biological...
Charisee Chiw, Gordon Kindlmann, John Reppy, Lamon...
SODA
2004
ACM
82views Algorithms» more  SODA 2004»
15 years 5 months ago
Dynamizing static algorithms, with applications to dynamic trees and history independence
We describe a machine model for automatically dynamizing static algorithms and apply it to historyindependent data structures. Static programs expressed in this model are dynamize...
Umut A. Acar, Guy E. Blelloch, Robert Harper, Jorg...
TRIER
2002
15 years 3 months ago
Precise Interprocedural Dependence Analysis of Parallel Programs
It is known that interprocedural detection of copy constants and elimination of faint code in parallel programs are undecidable problems, if base statements are assumed to execute...
Markus Müller-Olm