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RECOMB
2006
Springer
15 years 10 months ago
Integrated Protein Interaction Networks for 11 Microbes
We have combined four different types of functional genomic data to create high coverage protein interaction networks for 11 microbes. Our integration algorithm naturally handles s...
Balaji S. Srinivasan, Antal F. Novak, Jason Flanni...
RECOMB
2005
Springer
15 years 10 months ago
Using Multiple Alignments to Improve Gene Prediction
The multiple species de novo gene prediction problem can be stated as follows: given an alignment of genomic sequences from two or more organisms, predict the location and structur...
Samuel S. Gross, Michael R. Brent
ICC
2007
IEEE
145views Communications» more  ICC 2007»
15 years 4 months ago
Predicting User-Perceived Quality Ratings from Streaming Media Data
Abstract—Media stream quality is highly dependent on underlying network conditions, but identifying scalable, unambiguous metrics to discern the user-perceived quality of a media...
Amy Csizmar Dalal, David R. Musicant, Jamie F. Ols...
SIGSOFT
2006
ACM
15 years 3 months ago
Detecting increases in feature coupling using regression tests
Repeated changes to a software system can introduce small weaknesses such as unplanned dependencies between different parts of the system. While such problems usually go undetecte...
Olivier Giroux, Martin P. Robillard
IDEAL
2004
Springer
15 years 3 months ago
Building Genetic Networks for Gene Expression Patterns
Building genetic regulatory networks from time series data of gene expression patterns is an important topic in bioinformatics. Probabilistic Boolean networks (PBNs) have been deve...
Wai-Ki Ching, Eric S. Fung, Michael K. Ng