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NAR
2011
197views Computer Vision» more  NAR 2011»
14 years 15 days ago
dictyBase update 2011: web 2.0 functionality and the initial steps towards a genome portal for the Amoebozoa
dictyBase (http://www.dictybase.org), the model organism database for Dictyostelium, aims to provide the broad biomedical research community with well integrated, high quality dat...
Pascale Gaudet, Petra Fey, Siddhartha Basu, Yulia ...
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NAR
2002
125views more  NAR 2002»
14 years 9 months ago
ASTRAL compendium enhancements
The ASTRAL compendium provides several databases and tools to aid in the analysis of protein structures, particularly through the use of their sequences. It is partially derived f...
John-Marc Chandonia, Nigel S. Walker, Loredana Lo ...
BMCBI
2005
125views more  BMCBI 2005»
14 years 9 months ago
A simple approach for protein name identification: prospects and limits
Background: Significant parts of biological knowledge are available only as unstructured text in articles of biomedical journals. By automatically identifying gene and gene produc...
Katrin Fundel, Daniel Güttler, Ralf Zimmer, J...
BMCBI
2007
107views more  BMCBI 2007»
14 years 9 months ago
Linking microarray reporters with protein functions
Background: The analysis of microarray experiments requires accurate and up-to-date functional annotation of the microarray reporters to optimize the interpretation of the biologi...
Stan Gaj, Arie van Erk, Rachel I. M. van Haaften, ...
BMCBI
2005
122views more  BMCBI 2005»
14 years 9 months ago
Finding genomic ontology terms in text using evidence content
Background: The development of text mining systems that annotate biological entities with their properties using scientific literature is an important recent research topic. These...
Francisco M. Couto, Mário J. Silva, Pedro C...