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» Cross-Domain Approximate String Matching
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CSB
2005
IEEE
139views Bioinformatics» more  CSB 2005»
15 years 3 months ago
Using Parallel Algorithms for Searching Molecular Sequence Databases
This work presents the development of algorithms for approximate string matching using parallel methods. It intends to do the maximum of molecular sequences comparisons per unity ...
Carla Correa Tavares dos Reis, Rubem P. Mondaini
ACCV
2006
Springer
15 years 3 months ago
Statistical Shape Models Using Elastic-String Representations
Abstract. To develop statistical models for shapes, we utilize an elastic string representation where curves (denoting shapes) can bend and locally stretch (or compress) to optimal...
Anuj Srivastava, Aastha Jain, Shantanu H. Joshi, D...
SODA
2010
ACM
181views Algorithms» more  SODA 2010»
14 years 7 months ago
Near-Optimal Sublinear Time Algorithms for Ulam Distance
We give near-tight bounds for estimating the edit distance between two non-repetitive strings (Ulam distance) with constant approximation, in sub-linear time. For two strings of l...
Alexandr Andoni, Huy L. Nguyen
ICDE
2008
IEEE
163views Database» more  ICDE 2008»
15 years 10 months ago
Approximate Joins for Data-Centric XML
In data integration applications, a join matches elements that are common to two data sources. Often, however, elements are represented slightly different in each source, so an app...
Nikolaus Augsten, Michael H. Böhlen, Curtis E...
JDA
2008
87views more  JDA 2008»
14 years 9 months ago
Lossless filter for multiple repetitions with Hamming distance
Similarity search in texts, notably in biological sequences, has received substantial attention in the last few years. Numerous filtration and indexing techniques have been create...
Pierre Peterlongo, Nadia Pisanti, Fréd&eacu...