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ALGORITHMICA
2005
195views more  ALGORITHMICA 2005»
14 years 11 months ago
Bit-Parallel Witnesses and Their Applications to Approximate String Matching
We present a new bit-parallel technique for approximate string matching. We build on two previous techniques. The first one, BPM [Myers, J. of the ACM, 1999], searches for a patte...
Heikki Hyyrö, Gonzalo Navarro
CPM
1998
Springer
209views Combinatorics» more  CPM 1998»
15 years 3 months ago
A Fast Bit-Vector Algorithm for Approximate String Matching Based on Dynamic Programming
The approximate string matching problem is to find all locations at which a query of length m matches a substring of a text of length n with k-or-fewer differences. Simple and prac...
Gene Myers
SPIRE
2007
Springer
15 years 5 months ago
Approximate String Matching with Lempel-Ziv Compressed Indexes
Abstract. A compressed full-text self-index for a text T is a data structure requiring reduced space and able of searching for patterns P in T. Furthermore, the structure can repro...
Luís M. S. Russo, Gonzalo Navarro, Arlindo ...
PDPTA
2003
15 years 1 months ago
Flexible Approximate String Matching Application on a Heterogeneous Distributed Environment
In this paper, we present three parallel flexible approximate string matching methods on a parallel architecture with heterogeneous workstations to gain supercomputer power at lo...
Panagiotis D. Michailidis, Konstantinos G. Margari...
IJFCS
2002
58views more  IJFCS 2002»
14 years 11 months ago
Vector Algorithms for Approximate String Matching
Vector algorithms allow the computation of an output vector r = r1r2 :::rm given an input vector e = e1e2 :::em in a bounded number of operations, independent of m the length of t...
Anne Bergeron, Sylvie Hamel