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» Cross-species queries of large gene expression databases
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NAR
2011
208views Computer Vision» more  NAR 2011»
14 years 14 days ago
Tomato Functional Genomics Database: a comprehensive resource and analysis package for tomato functional genomics
Tomato Functional Genomics Database (TFGD) provides a comprehensive resource to store, query, mine, analyze, visualize and integrate large-scale tomato functional genomics data se...
Zhangjun Fei, Je-Gun Joung, Xuemei Tang, Yi Zheng,...
73
Voted
VLDB
2004
ACM
99views Database» more  VLDB 2004»
15 years 3 months ago
Query Languages and Data Models for Database Sequences and Data Streams
We study the fundamental limitations of relational algebra (RA) and SQL in supporting sequence and stream queries, and present effective query language and data model enrichments ...
Yan-Nei Law, Haixun Wang, Carlo Zaniolo
SIGMOD
2002
ACM
120views Database» more  SIGMOD 2002»
15 years 9 months ago
Exploiting statistics on query expressions for optimization
Statistics play an important role in influencing the plans produced by a query optimizer. Traditionally, optimizers use statistics built over base tables and assume independence b...
Nicolas Bruno, Surajit Chaudhuri
BMCBI
2008
130views more  BMCBI 2008»
14 years 9 months ago
A database of phylogenetically atypical genes in archaeal and bacterial genomes, identified using the DarkHorse algorithm
Background: The process of horizontal gene transfer (HGT) is believed to be widespread in Bacteria and Archaea, but little comparative data is available addressing its occurrence ...
Sheila Podell, Terry Gaasterland, Eric E. Allen
78
Voted
CSB
2005
IEEE
161views Bioinformatics» more  CSB 2005»
15 years 3 months ago
Data Integration in the Mouse Genome Informatics (MGI) Database
The Mouse Genome Informatics (MGI) Database at The Jackson Laboratory provides a comprehensive public resource about the laboratory mouse. MGI curated data types include gene repr...
Donnie Qi, Judith A. Blake, James A. Kadin, Joel E...