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» Cross-species queries of large gene expression databases
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BMCBI
2006
124views more  BMCBI 2006»
14 years 9 months ago
Predicting transcription factor binding sites using local over-representation and comparative genomics
Background: Identifying cis-regulatory elements is crucial to understanding gene expression, which highlights the importance of the computational detection of overrepresented tran...
Matthieu Defrance, Hélène Touzet
68
Voted
VLDB
2001
ACM
92views Database» more  VLDB 2001»
15 years 2 months ago
Fast Evaluation Techniques for Complex Similarity Queries
Complex similarity queries, i.e., multi-feature multi-object queries, are needed to express the information need of a user against a large multimedia repository. Even if a user in...
Klemens Böhm, Michael Mlivoncic, Hans-Jö...
ADC
2005
Springer
135views Database» more  ADC 2005»
15 years 3 months ago
A Path-based Relational RDF Database
We propose a path-based scheme for storage and retrieval of RDF data using a relational database. The Semantic Web is much anticipated as the nextgeneration web where high-level p...
Akiyoshi Matono, Toshiyuki Amagasa, Masatoshi Yosh...
BMCBI
2002
109views more  BMCBI 2002»
14 years 9 months ago
Kangaroo - A pattern-matching program for biological sequences
Background: Biologists are often interested in performing a simple database search to identify proteins or genes that contain a well-defined sequence pattern. Many databases do no...
Doron Betel, Christopher W. V. Hogue
ICDE
2008
IEEE
131views Database» more  ICDE 2008»
15 years 11 months ago
Parallel Evaluation of Composite Aggregate Queries
Aggregate measures summarizing subsets of data are valuable in exploratory analysis and decision support, especially when dependent aggregations can be easily specified and compute...
Lei Chen 0003, Christopher Olston, Raghu Ramakrish...