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» Cross-species queries of large gene expression databases
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BMCBI
2005
169views more  BMCBI 2005»
14 years 9 months ago
MAPPER: a search engine for the computational identification of putative transcription factor binding sites in multiple genomes
Background: Cis-regulatory modules are combinations of regulatory elements occurring in close proximity to each other that control the spatial and temporal expression of genes. Th...
Voichita D. Marinescu, Isaac S. Kohane, Alberto Ri...
151
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SIGMOD
2008
ACM
134views Database» more  SIGMOD 2008»
15 years 9 months ago
SystemT: a system for declarative information extraction
As applications within and outside the enterprise encounter increasing volumes of unstructured data, there has been renewed interest in the area of information extraction (IE) ? t...
Rajasekar Krishnamurthy, Yunyao Li, Sriram Raghava...
ICDT
2003
ACM
132views Database» more  ICDT 2003»
15 years 2 months ago
Probabilistic Interval XML
Interest in XML databases has been growing over the last few years. In this paper, we study the problem of incorporating probabilistic information into XML databases. We propose th...
Edward Hung, Lise Getoor, V. S. Subrahmanian
SIGMOD
2007
ACM
196views Database» more  SIGMOD 2007»
15 years 9 months ago
Adaptive location constraint processing
An important problem for many location-based applications is the continuous evaluation of proximity relations among moving objects. These relations express whether a given set of ...
Zhengdao Xu, Hans-Arno Jacobsen
BMCBI
2005
163views more  BMCBI 2005»
14 years 9 months ago
Alkahest NuclearBLAST: a user-friendly BLAST management and analysis system
Background -: Sequencing of EST and BAC end datasets is no longer limited to large research groups. Drops in per-base pricing have made high throughput sequencing accessible to in...
Stephen E. Diener, Thomas D. Houfek, Sam E. Kalat,...