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» Cross-species queries of large gene expression databases
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NAR
2010
123views more  NAR 2010»
14 years 4 months ago
Xenbase: gene expression and improved integration
Xenbase (www.xenbase.org), the model organism database for Xenopus laevis and X. (Silurana) tropicalis, is the principal centralized resource of genomic, development data and comm...
Jeff B. Bowes, Kevin A. Snyder, Erik Segerdell, Ch...
BMCBI
2008
125views more  BMCBI 2008»
14 years 9 months ago
SynteBase/SynteView: a tool to visualize gene order conservation in prokaryotic genomes
Background: It has been repeatedly observed that gene order is rapidly lost in prokaryotic genomes. However, persistent synteny blocks are found when comparing more or less distan...
Frédéric Lemoine, Bernard Labedan, O...
ECCB
2005
IEEE
15 years 3 months ago
A query language for biological networks
Many areas of modern biology are concerned with the management, storage, visualization, comparison, and analysis of networks. For instance, networks are used to model signal trans...
Ulf Leser
ICDE
2012
IEEE
232views Database» more  ICDE 2012»
13 years 1 days ago
Horton: Online Query Execution Engine for Large Distributed Graphs
—Large graphs are used in many applications, such as social networking. The management of these graphs poses new challenges because such graphs are too large to fit on a single ...
Mohamed Sarwat, Sameh Elnikety, Yuxiong He, Gabrie...
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BMCBI
2005
156views more  BMCBI 2005»
14 years 9 months ago
DynGO: a tool for visualizing and mining of Gene Ontology and its associations
Background: A large volume of data and information about genes and gene products has been stored in various molecular biology databases. A major challenge for knowledge discovery ...
Hongfang Liu, Zhang-Zhi Hu, Cathy H. Wu