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BMCBI
2010
143views more  BMCBI 2010»
14 years 9 months ago
An efficient biological pathway layout algorithm combining grid-layout and spring embedder for complicated cellular location inf
Background: Graph drawing is one of the important techniques for understanding biological regulations in a cell or among cells at the pathway level. Among many available layout al...
Kaname Kojima, Masao Nagasaki, Satoru Miyano
ALGORITHMICA
2010
127views more  ALGORITHMICA 2010»
14 years 9 months ago
An Algorithm for Minimum Cost Arc-Connectivity Orientations
Given a 2k-edge-connected undirected graph, we consider to find a minimum cost orientation that yields a k-arc-connected directed graph. This minimum cost k-arc-connected orientat...
Satoru Iwata, Yusuke Kobayashi
DCG
2006
110views more  DCG 2006»
14 years 9 months ago
High-Dimensional Centrally Symmetric Polytopes with Neighborliness Proportional to Dimension
Let A be a d by n matrix, d < n. Let C be the regular cross polytope (octahedron) in Rn . It has recently been shown that properties of the centrosymmetric polytope P = AC are ...
David L. Donoho
GD
2006
Springer
15 years 1 months ago
Planarity Testing and Optimal Edge Insertion with Embedding Constraints
The planarization method has proven to be successful in graph drawing. The output, a combinatorial planar embedding of the so-called planarized graph, can be combined with state-o...
Carsten Gutwenger, Karsten Klein, Petra Mutzel
FOCS
2006
IEEE
15 years 3 months ago
On a Geometric Generalization of the Upper Bound Theorem
We prove an upper bound, tight up to a factor of 2, for the number of vertices of level at most in an arrangement of n halfspaces in Rd , for arbitrary n and d (in particular, the...
Uli Wagner