Background: Identifying syntenic regions, i.e., blocks of genes or other markers with evolutionary conserved order, and quantifying evolutionary relatedness between genomes in ter...
Consider the problem of joint parameter estimation and prediction in a Markov random field: i.e., the model parameters are estimated on the basis of an initial set of data, and th...
Abstract. This paper compares two grammar based Evolutionary Automatic Programming methods, Grammatical Evolution (GE) and Chorus. Both systems evolve sequences of derivation rules...
Homology identification is the first step for many genomic studies. Current methods, based on sequence comparison, can result in a substantial number of mis-assignments due to the ...
This paper considers the problem of change detection using local distributed eigen monitoring algorithms for next generation of astronomy petascale data pipelines such as the Larg...