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BMCBI
2006
127views more  BMCBI 2006»
14 years 10 months ago
A graph-search framework for associating gene identifiers with documents
Background: One step in the model organism database curation process is to find, for each article, the identifier of every gene discussed in the article. We consider a relaxation ...
William W. Cohen, Einat Minkov
NAR
2010
111views more  NAR 2010»
14 years 5 months ago
JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles
JASPAR (http://jaspar.genereg.net) is the leading open-access database of matrix profiles describing the DNA-binding patterns of transcription factors (TFs) and other proteins int...
Elodie Portales-Casamar, Supat Thongjuea, Andrew T...
NAR
2011
256views Computer Vision» more  NAR 2011»
14 years 1 months ago
COSMIC: mining complete cancer genomes in the Catalogue of Somatic Mutations in Cancer
COSMIC (http://www.sanger.ac.uk/cosmic) curates comprehensive information on somatic mutations in human cancer. Release v48 (July 2010) describes over 136 000 coding mutations in ...
Simon A. Forbes, Nidhi Bindal, Sally Bamford, Char...
BMCBI
2010
96views more  BMCBI 2010»
14 years 10 months ago
The Protein-DNA Interface database
The Protein-DNA Interface database (PDIdb) is a repository containing relevant structural information of Protein-DNA complexes solved by X-ray crystallography and available at the...
Tomás Norambuena, Francisco Melo
NAR
2011
330views Computer Vision» more  NAR 2011»
14 years 5 months ago
Hymenoptera Genome Database: integrated community resources for insect species of the order Hymenoptera
The Hymenoptera Genome Database (HGD) is a comprehensive model organism database that caters to the needs of scientists working on insect species of the order Hymenoptera. This sy...
Monica C. Munoz-Torres, Justin T. Reese, Christoph...