EcoCyc (http://EcoCyc.org) is a comprehensive model organism database for Escherichia coli K-12 MG1655. From the scientific literature, EcoCyc captures the functions of individual...
Ingrid M. Keseler, Julio Collado-Vides, Alberto Sa...
Thousands of biochemical interactions are available for download from curated databases such as Reactome, Pathway Interaction Database and other sources in the Biological Pathways...
Oliver Ruebenacker, Ion I. Moraru, James C. Schaff...
Data provenance is essential in applications such as scientific computing, curated databases, and data warehouses. Several systems have been developed that provide provenance fun...
PathwayTools is a production-quality software environment for creating a type of model-organism database called a Pathway/Genome Database (PGDB). A PGDB such as EcoCyc integrates ...
Peter D. Karp, Suzanne M. Paley, Markus Krummenack...
We consider systems for data sharing among heterogeneous peers related by a network of schema mappings. Each peer has a locally controlled and edited database instance, but wants ...
Todd J. Green, Grigoris Karvounarakis, Zachary G. ...