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WASA
2009
Springer
189views Algorithms» more  WASA 2009»
15 years 5 months ago
Information Extraction as Link Prediction: Using Curated Citation Networks to Improve Gene Detection
Abstract. In this paper we explore the usefulness of various types of publicationrelated metadata, such as citation networks and curated databases, for the task of identifying gene...
Andrew Arnold, William W. Cohen
KDD
2007
ACM
186views Data Mining» more  KDD 2007»
15 years 10 months ago
An Ad Omnia Approach to Defining and Achieving Private Data Analysis
We briefly survey several privacy compromises in published datasets, some historical and some on paper. An inspection of these suggests that the problem lies with the nature of the...
Cynthia Dwork
BMCBI
2006
137views more  BMCBI 2006»
14 years 10 months ago
Curation of complex, context-dependent immunological data
Background: The Immune Epitope Database and Analysis Resource (IEDB) is dedicated to capturing, housing and analyzing complex immune epitope related data http:// www.immuneepitope...
Randi Vita, Kerrie Vaughan, Laura Zarebski, Nima S...
BMCBI
2008
150views more  BMCBI 2008»
14 years 10 months ago
Natural Language Processing in aid of FlyBase curators
Background: Despite increasing interest in applying Natural Language Processing (NLP) to biomedical text, whether this technology can facilitate tasks such as database curation re...
Nikiforos Karamanis, Ruth Seal, Ian Lewin, Peter M...
BMCBI
2007
160views more  BMCBI 2007»
14 years 10 months ago
Optimization based automated curation of metabolic reconstructions
Background: Currently, there exists tens of different microbial and eukaryotic metabolic reconstructions (e.g., Escherichia coli, Saccharomyces cerevisiae, Bacillus subtilis) with...
Vinay Satish Kumar, Madhukar S. Dasika, Costas D. ...