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» Current approaches to gene regulatory network modelling
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ESANN
2007
15 years 3 months ago
Adaptive Global Metamodeling with Neural Networks
Due to the scale and computational complexity of current simulation codes, metamodels (or surrogate models) have become indispensable tools for exploring and understanding the desi...
Dirk Gorissen, Wouter Hendrickx, Tom Dhaene
BMCBI
2011
14 years 5 months ago
Acorn: A grid computing system for constraint based modeling and visualization of the genome scale metabolic reaction networks v
Background: Constraint-based approaches facilitate the prediction of cellular metabolic capabilities, based, in turn on predictions of the repertoire of enzymes encoded in the gen...
Jacek Sroka, Lukasz Bieniasz-Krzywiec, Szymon Gwoz...
JCB
2007
198views more  JCB 2007»
15 years 1 months ago
Bayesian Hierarchical Model for Large-Scale Covariance Matrix Estimation
Many bioinformatics problems can implicitly depend on estimating large-scale covariance matrix. The traditional approaches tend to give rise to high variance and low accuracy esti...
Dongxiao Zhu, Alfred O. Hero III
141
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BMCBI
2007
105views more  BMCBI 2007»
15 years 1 months ago
Generating confidence intervals on biological networks
Background: In the analysis of networks we frequently require the statistical significance of some network statistic, such as measures of similarity for the properties of interact...
Thomas Thorne, Michael P. H. Stumpf
IFIP
2004
Springer
15 years 7 months ago
A Formal Approach to Specify and Deploy a Network Security Policy
Current firewall configuration languages have no well founded semantics. Each firewall implements its own algorithm that parses specific proprietary languages. The main conseq...
Frédéric Cuppens, Nora Cuppens-Boula...