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» DIP: the Database of Interacting Proteins
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NAR
2000
118views more  NAR 2000»
14 years 10 months ago
DIP: the Database of Interacting Proteins
The Database of Interacting Proteins (DIP; http:// dip.doe-mbi.ucla.edu) is a database that documents experimentally determined protein
Ioannis Xenarios, Danny W. Rice, Lukasz Salw&iacut...
ENGL
2008
121views more  ENGL 2008»
14 years 11 months ago
Prediction of Protein-Protein Interactions Using Pairwise Alignment and Inter-Domain Linker Region
One of the central problems in modern biology is to identify the complete set of interactions among the proteins in a cell. The structural interaction of proteins and their domains...
Nazar Zaki
ICDM
2003
IEEE
148views Data Mining» more  ICDM 2003»
15 years 4 months ago
Inference of Protein-Protein Interactions by Unlikely Profile Pair
We note that a set of statistically “unusual” proteinprofile pairs in experimentally determined database of protein-protein interactions can typify protein-protein interaction...
Byung-Hoon Park, George Ostrouchov, Gong-Xin Yu, A...
BMCBI
2008
121views more  BMCBI 2008»
14 years 11 months ago
iRefIndex: A consolidated protein interaction database with provenance
Background: Interaction data for a given protein may be spread across multiple databases. We set out to create a unifying index that would facilitate searching for these data and ...
Sabry Razick, George Magklaras, Ian M. Donaldson
BMCBI
2007
107views more  BMCBI 2007»
14 years 11 months ago
Reuse of structural domain-domain interactions in protein networks
Background: Protein interactions are thought to be largely mediated by interactions between structural domains. Databases such as iPfam relate interactions in protein structures t...
Benjamin Schuster-Böckler, Alex Bateman