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» DNA Computing Based on Splicing: Universality Results
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89
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BMCBI
2006
161views more  BMCBI 2006»
15 years 16 days ago
Comparative genomics in cyprinids: common carp ESTs help the annotation of the zebrafish genome
Background: Automatic annotation of sequenced eukaryotic genomes integrates a combination of methodologies such as ab-initio methods and alignment of homologous genes and/or prote...
Alan Christoffels, Richard Bartfai, Hamsa Srinivas...
BMCBI
2006
86views more  BMCBI 2006»
15 years 16 days ago
MCALIGN2: Faster, accurate global pairwise alignment of non-coding DNA sequences based on explicit models of indel evolution
Background: Non-coding DNA sequences comprise a very large proportion of the total genomic content of mammals, most other vertebrates, many invertebrates, and most plants. Unravel...
Jun Wang, Peter D. Keightley, Toby Johnson
62
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JMLR
2010
89views more  JMLR 2010»
14 years 7 months ago
Mass Fatality Incident Identification based on nuclear DNA evidence
This paper focuses on the use of nuclear DNA Short Tandem Repeat traits for the identification of the victims of a Mass Fatality Incident. The goal of the analysis is the assessme...
Fabio Corradi
BMCBI
2010
113views more  BMCBI 2010»
15 years 18 days ago
Unifying generative and discriminative learning principles
Background: The recognition of functional binding sites in genomic DNA remains one of the fundamental challenges of genome research. During the last decades, a plethora of differe...
Jens Keilwagen, Jan Grau, Stefan Posch, Marc Stric...
104
Voted
BMCBI
2006
116views more  BMCBI 2006»
15 years 16 days ago
Optimized mixed Markov models for motif identification
Background: Identifying functional elements, such as transcriptional factor binding sites, is a fundamental step in reconstructing gene regulatory networks and remains a challengi...
Weichun Huang, David M. Umbach, Uwe Ohler, Leping ...