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136
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ISMB
1998
15 years 3 months ago
Computational Applications of DNA Structural Scales
We study from a computational standpoint several different physicalscales associatedwith structural features of DNA sequences, including dinucleotide scales such as base stacking ...
Pierre Baldi, Søren Brunak, Yves Chauvin, A...
125
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FCS
2006
15 years 4 months ago
Procedures for multiplication and division in DNA computing
: In this paper, we propose two procedures for multiplication and division using DNA strands. We first show a procedure for multiplication of a pair of two binary numbers. The proc...
Hiroki Fukagawa, Akihiro Fujiwara
92
Voted
IPPS
2000
IEEE
15 years 7 months ago
A Surface-Based DNA Algorithm for the Expansion of Symbolic Determinants
In the past few years since Adleman’s pioneering work on solving the HPP(Hamiltonian Path Problem) with a DNA-based computer [1], many algorithms have been designed on solving NP...
Zhiquan Frank Qiu, Mi Lu
115
Voted
BMCBI
2006
116views more  BMCBI 2006»
15 years 2 months ago
MICA: desktop software for comprehensive searching of DNA databases
Background: Molecular biologists work with DNA databases that often include entire genomes. A common requirement is to search a DNA database to find exact matches for a nondegener...
William A. Stokes, Benjamin S. Glick
124
Voted
IPPS
2003
IEEE
15 years 7 months ago
Addressable Procedures for Logic and Arithmetic Operations with DNA Strands
In this paper, we consider addressable procedures with DNA strands for logic and arithmetic operations. Using a theoretical model for DNA computing, we first show a DNA represent...
Akihiro Fujiwara, Ken-ichi Matsumoto, Wei Chen