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NAR
2010
184views more  NAR 2010»
14 years 4 months ago
RegPrecise: a database of curated genomic inferences of transcriptional regulatory interactions in prokaryotes
The RegPrecise database (http://regprecise.lbl.gov) was developed for capturing, visualization and analysis of predicted transcription factor regulons in prokaryotes that were rec...
Pavel S. Novichkov, Olga N. Laikova, Elena S. Novi...
BMCBI
2008
111views more  BMCBI 2008»
14 years 10 months ago
VisualRepbase: an interface for the study of occurrences of transposable element families
Background: Repbase is a reference database of eukaryotic repetitive DNA, which includes prototypic sequences of repeats and basic information described in annotations. Repbase al...
Sébastien Tempel, Matthew Jurka, Jerzy Jurk...
SAMT
2009
Springer
135views Multimedia» more  SAMT 2009»
15 years 4 months ago
Exploring Relationships between Annotated Images with the ChainGraph Visualization
Abstract. Understanding relationships and commonalities between digital contents based on metadata is a difficult user task that requires sophisticated presentation forms. In this ...
Steffen Lohmann, Philipp Heim, Lena Tetzlaff, Thom...
NAR
2011
208views Computer Vision» more  NAR 2011»
14 years 22 days ago
The UCSC Genome Browser database: update 2011
The University of California, Santa Cruz Genome Browser (http://genome.ucsc.edu) offers online access to a database of genomic sequence and annotation data for a wide variety of o...
Pauline A. Fujita, Brooke L. Rhead, Ann S. Zweig, ...
BMCBI
2010
161views more  BMCBI 2010»
14 years 10 months ago
GATExplorer: Genomic and Transcriptomic Explorer; mapping expression probes to gene loci, transcripts, exons and ncRNAs
Background: Genome-wide expression studies have developed exponentially in recent years as a result of extensive use of microarray technology. However, expression signals are typi...
Alberto Risueño, Celia Fontanillo, Marcel E...