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CSR
2006
Springer
15 years 7 months ago
Fast Motif Search in Protein Sequence Databases
Regular expression pattern matching is widely used in computational biology. Searching through a database of sequences for a motif (a simple regular expression), or its variations...
Elena Zheleva, Abdullah N. Arslan
114
Voted
ICFP
2010
ACM
15 years 4 months ago
Distance makes the types grow stronger: a calculus for differential privacy
We want assurances that sensitive information will not be disclosed when aggregate data derived from a database is published. Differential privacy offers a strong statistical guar...
Jason Reed, Benjamin C. Pierce
137
Voted
CIKM
2010
Springer
15 years 2 months ago
Learning to rank relevant and novel documents through user feedback
We consider the problem of learning to rank relevant and novel documents so as to directly maximize a performance metric called Expected Global Utility (EGU), which has several de...
Abhimanyu Lad, Yiming Yang
238
Voted
SASP
2009
IEEE
291views Hardware» more  SASP 2009»
15 years 10 months ago
A parameterisable and scalable Smith-Waterman algorithm implementation on CUDA-compatible GPUs
—This paper describes a multi-threaded parallel design and implementation of the Smith-Waterman (SM) algorithm on compute unified device architecture (CUDA)-compatible graphic pr...
Cheng Ling, Khaled Benkrid, Tsuyoshi Hamada
127
Voted
VLDB
1997
ACM
97views Database» more  VLDB 1997»
15 years 7 months ago
The Complexity of Transformation-Based Join Enumeration
Query optimizers that explore a search space exhaustively using transformation rules usually apply all possible rules on each alternative, and stop when no new information is prod...
Arjan Pellenkoft, César A. Galindo-Legaria,...
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