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NAR
2011
274views Computer Vision» more  NAR 2011»
14 years 4 months ago
A series of PDB related databases for everyday needs
The Protein Data Bank (PDB) is the world-wide repository of macromolecular structure information. We present a series of databases that run parallel to the PDB. Each database hold...
Robbie P. Joosten, Tim A. H. te Beek, Elmar Kriege...
SIGMOD
1996
ACM
99views Database» more  SIGMOD 1996»
15 years 1 months ago
A Query Language for Multidimensional Arrays: Design, Implementation, and Optimization Techniques
While much recent research has focussed on extending databases beyond the traditional relational model, relatively little has been done to develop database tools for querying data...
Leonid Libkin, Rona Machlin, Limsoon Wong
OWLED
2008
14 years 11 months ago
GO faster ChEBI with Reasonable Biochemistry
Chemical Entities of Biological Interest (ChEBI) is a database and ontology that represents biochemical knowledge about small molecules. Recent changes to the ontology have created...
Duncan Hull
VLDB
2005
ACM
103views Database» more  VLDB 2005»
15 years 3 months ago
Semantic Query Optimization for XQuery over XML Streams
We study XML stream-specific schema-based optimization. We assume a widely-adopted automata-based execution model for XQuery evaluation. Criteria are established regarding what s...
Hong Su, Elke A. Rundensteiner, Murali Mani
BMCBI
2008
175views more  BMCBI 2008»
14 years 9 months ago
Comprehensive inventory of protein complexes in the Protein Data Bank from consistent classification of interfaces
Background: Protein-protein interactions are ubiquitous and essential for all cellular processes. High-resolution X-ray crystallographic structures of protein complexes can reveal...
Andrew J. Bordner, Andrey A. Gorin