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» Data Cleaning and Semantic Improvement in Biological Databas...
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NAR
2008
191views more  NAR 2008»
14 years 9 months ago
The BioGRID Interaction Database: 2008 update
The Biological General Repository for Interaction Datasets (BioGRID) database (http://www. thebiogrid.org) was developed to house and distribute collections of protein and genetic...
Bobby-Joe Breitkreutz, Chris Stark, Teresa Reguly,...
SACMAT
2010
ACM
15 years 2 months ago
Mining roles with noisy data
There has been increasing interest in automatic techniques for generating roles for role based access control, a process known as role mining. Most role mining approaches assume t...
Ian Molloy, Ninghui Li, Yuan (Alan) Qi, Jorge Lobo...
BIBM
2008
IEEE
125views Bioinformatics» more  BIBM 2008»
14 years 11 months ago
On the Role of Local Matching for Efficient Semi-supervised Protein Sequence Classification
Recent studies in protein sequence analysis have leveraged the power of unlabeled data. For example, the profile and mismatch neighborhood kernels have shown significant improveme...
Pavel P. Kuksa, Pai-Hsi Huang, Vladimir Pavlovic
BMCBI
2006
145views more  BMCBI 2006»
14 years 9 months ago
Querying the public databases for sequences using complex keywords contained in the feature lines
Background: High throughput technologies often require the retrieval of large data sets of sequences. Retrieval of EMBL or GenBank entries using keywords is easy using tools such ...
Olivier Croce, Michaël Lamarre, Richard Chris...
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BMCBI
2010
193views more  BMCBI 2010»
14 years 9 months ago
MZmine 2: Modular framework for processing, visualizing, and analyzing mass spectrometry-based molecular profile data
Background: Mass spectrometry (MS) coupled with online separation methods is commonly applied for differential and quantitative profiling of biological samples in metabolomic as w...
Tomás Pluskal, Sandra Castillo, Alejandro V...