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BMCBI
2010
153views more  BMCBI 2010»
15 years 4 months ago
Starr: Simple Tiling ARRay analysis of Affymetrix ChIP-chip data
Background: Chromatin immunoprecipitation combined with DNA microarrays (ChIP-chip) is an assay used for investigating DNA-protein-binding or post-translational chromatin/histone ...
Benedikt Zacher, Pei Fen Kuan, Achim Tresch
BMCBI
2006
164views more  BMCBI 2006»
15 years 4 months ago
Evaluation of clustering algorithms for gene expression data
Background: Cluster analysis is an integral part of high dimensional data analysis. In the context of large scale gene expression data, a filtered set of genes are grouped togethe...
Susmita Datta, Somnath Datta
ER
1995
Springer
152views Database» more  ER 1995»
15 years 8 months ago
A Logic Framework for a Semantics of Object-Oriented Data Modeling
We describe a (meta) formalism for defining a variety of (object oriented) data models in a unified framework based on a variation of first-order logic. As specific example we use...
Olga De Troyer, Robert Meersman
BMCBI
2007
169views more  BMCBI 2007»
15 years 4 months ago
Transcriptional regulatory network refinement and quantification through kinetic modeling, gene expression microarray data and i
Background: Gene expression microarray and other multiplex data hold promise for addressing the challenges of cellular complexity, refined diagnoses and the discovery of well-targ...
Abdallah Sayyed-Ahmad, Kagan Tuncay, Peter J. Orto...
BMCBI
2004
185views more  BMCBI 2004»
15 years 4 months ago
Linear fuzzy gene network models obtained from microarray data by exhaustive search
Background: Recent technological advances in high-throughput data collection allow for experimental study of increasingly complex systems on the scale of the whole cellular genome...
Bahrad A. Sokhansanj, J. Patrick Fitch, Judy N. Qu...