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» Data Mining for Genetics: A Genetic Algorithm Approach
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BMCBI
2007
147views more  BMCBI 2007»
15 years 4 months ago
Predicting combinatorial binding of transcription factors to regulatory elements in the human genome by association rule mining
Background: Cis-acting transcriptional regulatory elements in mammalian genomes typically contain specific combinations of binding sites for various transcription factors. Althoug...
Xochitl C. Morgan, Shulin Ni, Daniel P. Miranker, ...
BMCBI
2008
96views more  BMCBI 2008»
15 years 4 months ago
Novel methodology for construction and pruning of quasi-median networks
Background: Visualising the evolutionary history of a set of sequences is a challenge for molecular phylogenetics. One approach is to use undirected graphs, such as median network...
Sarah C. Ayling, Terence A. Brown
BMCBI
2008
83views more  BMCBI 2008»
15 years 4 months ago
Models of deletion for visualizing bacterial variation: an application to tuberculosis spoligotypes
Background: Molecular typing methods are commonly used to study genetic relationships among bacterial isolates. Many of these methods have become standardized and produce portable...
Josephine F. Reyes, Andrew R. Francis, Mark M. Tan...
CGF
2008
142views more  CGF 2008»
15 years 4 months ago
Visualizing Genome Expression and Regulatory Network Dynamics in Genomic and Metabolic Context
DNA microarrays are used to measure the expression levels of thousands of genes simultaneously. In a time series experiment, the gene expressions are measured as a function of tim...
Michel A. Westenberg, Sacha A. F. T. van Hijum, Os...
MLG
2007
Springer
15 years 10 months ago
Weighted Substructure Mining for Image Analysis
1 In web-related applications of image categorization, it is desirable to derive an interpretable classification rule with high accuracy. Using the bag-of-words representation and...
Sebastian Nowozin, Koji Tsuda, Takeaki Uno, Taku K...