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» Data Mining in the Bioinformatics Domain
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BMCBI
2011
14 years 6 months ago
A lightweight, flow-based toolkit for parallel and distributed bioinformatics pipelines
Background: Bioinformatic analyses typically proceed as chains of data-processing tasks. A pipeline, or ‘workflow’, is a well-defined protocol, with a specific structure defin...
Marcin Cieslik, Cameron Mura
BMCBI
2007
177views more  BMCBI 2007»
14 years 11 months ago
Biowep: a workflow enactment portal for bioinformatics applications
Background: The huge amount of biological information, its distribution over the Internet and the heterogeneity of available software tools makes the adoption of new data integrat...
Paolo Romano 0001, Ezio Bartocci, Guglielmo Bertol...
JCIT
2008
108views more  JCIT 2008»
14 years 11 months ago
Data Mining for Genetics: A Genetic Algorithm Approach
MINING biological data is an emerging area of intersection between data mining and bioinformatics. Bio-informaticians have been working on the research and development of computat...
G. Madhu, Keshava Reddy
KDD
2003
ACM
145views Data Mining» more  KDD 2003»
16 years 4 days ago
Carpenter: finding closed patterns in long biological datasets
The growth of bioinformatics has resulted in datasets with new characteristics. These datasets typically contain a large number of columns and a small number of rows. For example,...
Feng Pan, Gao Cong, Anthony K. H. Tung, Jiong Yang...
BIBE
2000
IEEE
15 years 3 months ago
Mining Residue Contacts in Proteins
In this paper we develop data mining techniques to predict 3D contact potentials among protein residues (or amino acids) based on the hierarchical nucleationpropagation model of p...
Mohammed Javeed Zaki, Shan Jin, Chris Bystroff