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BMCBI
2006
114views more  BMCBI 2006»
14 years 9 months ago
PROMPT: a protein mapping and comparison tool
Background: Comparison of large protein datasets has become a standard task in bioinformatics. Typically researchers wish to know whether one group of proteins is significantly en...
Thorsten Schmidt, Dmitrij Frishman
BMCBI
2007
165views more  BMCBI 2007»
14 years 9 months ago
Automatic reconstruction of a bacterial regulatory network using Natural Language Processing
Background: Manual curation of biological databases, an expensive and labor-intensive process, is essential for high quality integrated data. In this paper we report the implement...
Carlos Rodríguez Penagos, Heladia Salgado, ...
119
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BMCBI
2004
110views more  BMCBI 2004»
14 years 9 months ago
Tools for loading MEDLINE into a local relational database
Background: Researchers who use MEDLINE for text mining, information extraction, or natural language processing may benefit from having a copy of MEDLINE that they can manage loca...
Diane E. Oliver, Gaurav Bhalotia, Ariel S. Schwart...
JMLR
2012
13 years 3 days ago
Metric and Kernel Learning Using a Linear Transformation
Metric and kernel learning arise in several machine learning applications. However, most existing metric learning algorithms are limited to learning metrics over low-dimensional d...
Prateek Jain, Brian Kulis, Jason V. Davis, Inderji...
71
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WWW
2009
ACM
15 years 4 months ago
News article extraction with template-independent wrapper
We consider the problem of template-independent news extraction. The state-of-the-art news extraction method is based on template-level wrapper induction, which has two serious li...
Junfeng Wang, Xiaofei He, Can Wang, Jian Pei, Jiaj...
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