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WABI
2001
Springer
142views Bioinformatics» more  WABI 2001»
15 years 7 months ago
Pattern Matching and Pattern Discovery Algorithms for Protein Topologies
We describe algorithms for pattern matching and pattern learning in TOPS diagrams (formal descriptions of protein topologies). These problems can be reduced to checking for subgrap...
Juris Viksna, David Gilbert
SOFSEM
1997
Springer
15 years 7 months ago
Algorithms for Triangulated Terrains
Digital elevation models can represent many types of geographic data. One of the common digital elevation models is the triangulated irregular network also called TIN, or polyhed...
Marc J. van Kreveld
CIBCB
2009
IEEE
15 years 3 months ago
rnaDesign: Local search for RNA secondary structure design
Abstract-- The RNA secondary structure design (SSD) problem is a recently emerging research topic motivated by applications such as customized drug design and the self-assembly of ...
Denny C. Dai, Herbert H. Tsang, Kay C. Wiese
BMCBI
2005
126views more  BMCBI 2005»
15 years 2 months ago
GANN: Genetic algorithm neural networks for the detection of conserved combinations of features in DNA
Background: The multitude of motif detection algorithms developed to date have largely focused on the detection of patterns in primary sequence. Since sequence-dependent DNA struc...
Robert G. Beiko, Robert L. Charlebois
UAI
2004
15 years 4 months ago
"Ideal Parent" Structure Learning for Continuous Variable Networks
In recent years, there is a growing interest in learning Bayesian networks with continuous variables. Learning the structure of such networks is a computationally expensive proced...
Iftach Nachman, Gal Elidan, Nir Friedman