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» Data hiding methods based upon DNA sequences
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HIS
2009
14 years 7 months ago
An Efficient VQ-Based Data Hiding Scheme Using Voronoi Clustering
In this paper, we propose a vector quantization (VQ) -based information hiding scheme that cluster the VQ codeowrds according the codewords' relation on Voronoi Diagram (VD). ...
Ming-Ni Wu, Puu-An Juang, Yu-Chiang Li
BMCBI
2006
86views more  BMCBI 2006»
14 years 9 months ago
MCALIGN2: Faster, accurate global pairwise alignment of non-coding DNA sequences based on explicit models of indel evolution
Background: Non-coding DNA sequences comprise a very large proportion of the total genomic content of mammals, most other vertebrates, many invertebrates, and most plants. Unravel...
Jun Wang, Peter D. Keightley, Toby Johnson
BMCBI
2005
82views more  BMCBI 2005»
14 years 9 months ago
A novel method for prokaryotic promoter prediction based on DNA stability
Background: In the post-genomic era, correct gene prediction has become one of the biggest challenges in genome annotation. Improved promoter prediction methods can be one step to...
Aditi Kanhere, Manju Bansal
RECOMB
2008
Springer
15 years 9 months ago
A Fast, Alignment-Free, Conservation-Based Method for Transcription Factor Binding Site Discovery
As an increasing number of eukaryotic genomes are being sequenced, comparative studies aimed at detecting regulatory elements in intergenic sequences are becoming more prevalent. M...
Raluca Gordân, Leelavati Narlikar, Alexander...
IPPS
2009
IEEE
15 years 4 months ago
Accelerating error correction in high-throughput short-read DNA sequencing data with CUDA
Emerging DNA sequencing technologies open up exciting new opportunities for genome sequencing by generating read data with a massive throughput. However, produced reads are signif...
Haixiang Shi, Bertil Schmidt, Weiguo Liu, Wolfgang...