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IPPS
2009
IEEE
14 years 1 months ago
Dynamic parallelization for RNA structure comparison
In this paper we describe the parallelization of a dynamic programming algorithm used to find common RNA secondary structures including pseudoknots and similar structures. The se...
Eric Snow, Eric Aubanel, Patricia Evans
ISPASS
2003
IEEE
13 years 11 months ago
Accelerating private-key cryptography via multithreading on symmetric multiprocessors
Achieving high performance in cryptographic processing is important due to the increasing connectivity among today’s computers. Despite steady improvements in microprocessor and...
Praveen Dongara, T. N. Vijaykumar
ICPP
2003
IEEE
13 years 11 months ago
Enabling Partial Cache Line Prefetching Through Data Compression
Hardware prefetching is a simple and effective technique for hiding cache miss latency and thus improving the overall performance. However, it comes with addition of prefetch buff...
Youtao Zhang, Rajiv Gupta
MOBIWAC
2009
ACM
13 years 11 months ago
Adaptive, direction-aware data dissemination for diverse sensor mobility
We consider sensor networks where the sensor nodes are attached on entities that move in a highly dynamic, heterogeneous manner. To capture this mobility diversity we introduce a ...
Azzedine Boukerche, Dionysios Efstathiou, Sotiris ...
SC
2000
ACM
13 years 10 months ago
A Comparison of Three Programming Models for Adaptive Applications on the Origin2000
Adaptive applications have computational workloads and communication patterns which change unpredictably at runtime, requiring dynamic load balancing to achieve scalable performan...
Hongzhang Shan, Jaswinder Pal Singh, Leonid Oliker...