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BMCBI
2010
167views more  BMCBI 2010»
14 years 9 months ago
Bi-directional gene set enrichment and canonical correlation analysis identify key diet-sensitive pathways and biomarkers of met
Background: Currently, a number of bioinformatics methods are available to generate appropriate lists of genes from a microarray experiment. While these lists represent an accurat...
Melissa J. Morine, Jolene McMonagle, Sinead Toomey...
ESANN
2006
14 years 11 months ago
Independent dynamics subspace analysis
Abstract. The paper presents an algorithm for identifying the independent subspace analysis model based on source dynamics. We propose to separate subspaces by decoupling their dyn...
Alexander Ilin
ANSS
2006
IEEE
15 years 3 months ago
Simulation and Analysis of Complex Biological Processes: an Organisation Modelling Perspective
This paper explores how the dynamics of complex biological processes can be modelled and simulated as an organisation of multiple agents. This modelling perspective identifies org...
Tibor Bosse, Catholijn M. Jonker, Jan Treur
BMCBI
2008
146views more  BMCBI 2008»
14 years 9 months ago
A phase synchronization clustering algorithm for identifying interesting groups of genes from cell cycle expression data
Background: The previous studies of genome-wide expression patterns show that a certain percentage of genes are cell cycle regulated. The expression data has been analyzed in a nu...
Chang Sik Kim, Cheol Soo Bae, Hong Joon Tcha
SPIN
2009
Springer
15 years 4 months ago
Automatic Discovery of Transition Symmetry in Multithreaded Programs Using Dynamic Analysis
While symmetry reduction has been established to be an important technique for reducing the search space in model checking, its application in concurrent software verification is ...
Yu Yang, Xiaofang Chen, Ganesh Gopalakrishnan, Cha...