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BMCBI
2010
149views more  BMCBI 2010»
15 years 5 months ago
Identifying common prognostic factors in genomic cancer studies: A novel index for censored outcomes
Background: With the growing number of public repositories for high-throughput genomic data, it is of great interest to combine the results produced by independent research groups...
Sigrid Rouam, Thierry Moreau, Philippe Broët
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BMCBI
2008
135views more  BMCBI 2008»
15 years 5 months ago
Facilitating the development of controlled vocabularies for metabolomics technologies with text mining
Background: Many bioinformatics applications rely on controlled vocabularies or ontologies to consistently interpret and seamlessly integrate information scattered across public r...
Irena Spasic, Daniel Schober, Susanna-Assunta Sans...
BMCBI
2008
132views more  BMCBI 2008»
15 years 5 months ago
The SeqWord Genome Browser: an online tool for the identification and visualization of atypical regions of bacterial genomes thr
Background: Data mining in large DNA sequences is a major challenge in microbial genomics and bioinformatics. Oligonucleotide usage (OU) patterns provide a wealth of information f...
Hamilton Ganesan, Anna S. Rakitianskaia, Colin F. ...
COMPUTING
2008
94views more  COMPUTING 2008»
15 years 5 months ago
Two new methods for constructing double-ended priority queues from priority queues
We introduce two data-structural transformations to construct doubleended priority queues from priority queues. To apply our transformations the priority queues exploited must sup...
Amr Elmasry, Claus Jensen, Jyrki Katajainen
BMCBI
2006
171views more  BMCBI 2006»
15 years 4 months ago
The effect of oligonucleotide microarray data pre-processing on the analysis of patient-cohort studies
Background: Intensity values measured by Affymetrix microarrays have to be both normalized, to be able to compare different microarrays by removing non-biological variation, and s...
Roel G. W. Verhaak, Frank J. T. Staal, Peter J. M....