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BMCBI
2010
83views more  BMCBI 2010»
15 years 4 months ago
Trees on networks: resolving statistical patterns of phylogenetic similarities among interacting proteins
Background: Phylogenies capture the evolutionary ancestry linking extant species. Correlations and similarities among a set of species are mediated by and need to be understood in...
William P. Kelly, Michael P. H. Stumpf
BMCBI
2008
134views more  BMCBI 2008»
15 years 4 months ago
Identification of transcription factor contexts in literature using machine learning approaches
Background: Availability of information about transcription factors (TFs) is crucial for genome biology, as TFs play a central role in the regulation of gene expression. While man...
Hui Yang, Goran Nenadic, John A. Keane
BMCBI
2006
146views more  BMCBI 2006»
15 years 4 months ago
Optimized Particle Swarm Optimization (OPSO) and its application to artificial neural network training
Background: Particle Swarm Optimization (PSO) is an established method for parameter optimization. It represents a population-based adaptive optimization technique that is influen...
Michael Meissner, Michael Schmuker, Gisbert Schnei...
BMCBI
2006
141views more  BMCBI 2006»
15 years 4 months ago
Visual setup of logical models of signaling and regulatory networks with ProMoT
Background: The analysis of biochemical networks using a logical (Boolean) description is an important approach in Systems Biology. Recently, new methods have been proposed to ana...
Julio Saez-Rodriguez, Sebastian Mirschel, Rebecca ...
ENTCS
2006
1305views more  ENTCS 2006»
15 years 4 months ago
Communication Attitudes: A Formal Approach to Ostensible Intentions, and Individual and Group Opinions
Conventional approaches to the modeling of autonomous agents and agent communication rely heavily on the ascription of mental properties like beliefs and intentions to the individ...
Matthias Nickles, Felix A. Fischer, Gerhard Wei&sz...
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