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» Databases and Algorithms for Pathway Bioinformatics
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BMCBI
2007
116views more  BMCBI 2007»
14 years 9 months ago
Cloning, analysis and functional annotation of expressed sequence tags from the Earthworm Eisenia fetida
Background: Eisenia fetida, commonly known as red wiggler or compost worm, belongs to the Lumbricidae family of the Annelida phylum. Little is known about its genome sequence alth...
Mehdi Pirooznia, Ping Gong, Xin Guan, Laura S. Ino...
ICDM
2006
IEEE
132views Data Mining» more  ICDM 2006»
15 years 3 months ago
Mining for Tree-Query Associations in a Graph
New applications of data mining, such as in biology, bioinformatics, or sociology, are faced with large datasets structured as graphs. We present an efficient algorithm for minin...
Eveline Hoekx, Jan Van den Bussche
WABI
2009
Springer
130views Bioinformatics» more  WABI 2009»
15 years 4 months ago
Linear-Time Protein 3-D Structure Searching with Insertions and Deletions
It becomes more and more important to search for similar structures from molecular 3-D structure databases in the structural biology of the post genomic era. Two molecules are said...
Tetsuo Shibuya, Jesper Jansson, Kunihiko Sadakane
90
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BIBM
2008
IEEE
172views Bioinformatics» more  BIBM 2008»
15 years 4 months ago
Boosting Methods for Protein Fold Recognition: An Empirical Comparison
Protein fold recognition is the prediction of protein’s tertiary structure (Fold) given the protein’s sequence without relying on sequence similarity. Using machine learning t...
Yazhene Krishnaraj, Chandan K. Reddy
JCP
2007
94views more  JCP 2007»
14 years 9 months ago
Low-Complexity Analysis of Repetitive Regularities for Biometric Applications
— Presented in this paper is a joint algorithm optimization and architecture design framework for analysis of repetitive regularities. Two closely coupled algorithm optimization ...
Lei Wang, Niral Patel