Microarray datasets typically contain large number of columns but small number of rows. Association rules have been proved to be useful in analyzing such datasets. However, most e...
Gao Cong, Anthony K. H. Tung, Xin Xu, Feng Pan, Ji...
Background: High-throughput sequencing (HTS) technologies play important roles in the life sciences by allowing the rapid parallel sequencing of very large numbers of relatively s...
Kenny Daily, Paul Rigor, Scott Christley, Xiaohui ...
—This paper describes a multi-threaded parallel design and implementation of the Smith-Waterman (SM) algorithm on compute unified device architecture (CUDA)-compatible graphic pr...
Peptide-based vaccines, in which small peptides derived from target proteins (epitopes) are used to provoke an immune reaction, have attracted considerable attention recently as a...
We study suitable indexing techniques to support efficient exact match search in large biological sequence databases. We propose a suffix tree (ST) representation, called STA-DF, ...
Mihail Halachev, Nematollaah Shiri, Anand Thamildu...