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» Databases and Algorithms for Pathway Bioinformatics
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67
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VLDB
2004
ACM
178views Database» more  VLDB 2004»
15 years 2 months ago
High-Dimensional OLAP: A Minimal Cubing Approach
Data cube has been playing an essential role in fast OLAP (online analytical processing) in many multi-dimensional data warehouses. However, there exist data sets in applications ...
Xiaolei Li, Jiawei Han, Hector Gonzalez
92
Voted
DASFAA
2003
IEEE
151views Database» more  DASFAA 2003»
15 years 2 months ago
Approximate String Matching in DNA Sequences
Approximate string matching on large DNA sequences data is very important in bioinformatics. Some studies have shown that suffix tree is an efficient data structure for approxim...
Lok-Lam Cheng, David Wai-Lok Cheung, Siu-Ming Yiu
WABI
2009
Springer
102views Bioinformatics» more  WABI 2009»
15 years 4 months ago
A Tree Based Method for the Rapid Screening of Chemical Fingerprints
Background: The fingerprint of a molecule is a bitstring based on its structure, constructed such that structurally similar molecules will have similar fingerprints. Molecular fin...
Thomas G. Kristensen, Jesper Nielsen, Christian N....
CSB
2005
IEEE
168views Bioinformatics» more  CSB 2005»
15 years 3 months ago
cis-Regulatory Element Prediction in Mammalian Genomes
The identification of cis-regulatory elements and modules is an important step in understanding the regulation of genes. We have developed a pipeline capable of running multiple m...
Asim S. Siddiqui, Gordon Robertson, Misha Bilenky,...
96
Voted
CF
2009
ACM
15 years 4 months ago
Quantitative analysis of sequence alignment applications on multiprocessor architectures
The exponential growth of databases that contains biological information (such as protein and DNA data) demands great efforts to improve the performance of computational platforms...
Friman Sánchez, Alex Ramírez, Mateo ...