Sciweavers

248 search results - page 44 / 50
» Databases and Algorithms for Pathway Bioinformatics
Sort
View
LION
2009
Springer
114views Optimization» more  LION 2009»
15 years 4 months ago
Substitution Matrices and Mutual Information Approaches to Modeling Evolution
Abstract. Substitution matrices are at the heart of Bioinformatics: sequence alignment, database search, phylogenetic inference, protein family classication are based on Blosum, P...
Stephan Kitchovitch, Yuedong Song, Richard C. van ...
FCCM
2006
IEEE
137views VLSI» more  FCCM 2006»
15 years 3 months ago
Single Pass, BLAST-Like, Approximate String Matching on FPGAs
Abstract: Approximate string matching is fundamental to bioinformatics, and has been the subject of numerous FPGA acceleration studies. We address issues with respect to FPGA imple...
Martin C. Herbordt, Josh Model, Yongfeng Gu, Bhara...
KDD
2008
ACM
137views Data Mining» more  KDD 2008»
15 years 9 months ago
Learning classifiers from only positive and unlabeled data
The input to an algorithm that learns a binary classifier normally consists of two sets of examples, where one set consists of positive examples of the concept to be learned, and ...
Charles Elkan, Keith Noto
BMCBI
2005
162views more  BMCBI 2005»
14 years 9 months ago
Accelerated probabilistic inference of RNA structure evolution
Background: Pairwise stochastic context-free grammars (Pair SCFGs) are powerful tools for evolutionary analysis of RNA, including simultaneous RNA sequence alignment and secondary...
Ian Holmes
KDD
2009
ACM
215views Data Mining» more  KDD 2009»
15 years 10 months ago
Large-scale sparse logistic regression
Logistic Regression is a well-known classification method that has been used widely in many applications of data mining, machine learning, computer vision, and bioinformatics. Spa...
Jun Liu, Jianhui Chen, Jieping Ye