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96
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SOSP
1997
ACM
14 years 11 months ago
Towards Transparent and Efficient Software Distributed Shared Memory
Despite a large research effort, software distributed shared memory systems have not been widely used to run parallel applications across clusters of computers. The higher perform...
Daniel J. Scales, Kourosh Gharachorloo
92
Voted
BMCBI
2008
124views more  BMCBI 2008»
14 years 10 months ago
Inferring modules of functionally interacting proteins using the Bond Energy Algorithm
Background: Non-homology based methods such as phylogenetic profiles are effective for predicting functional relationships between proteins with no considerable sequence or struct...
Ryosuke Watanabe, Enrique Morett, Edgar E. Vallejo
81
Voted
BMCBI
2006
98views more  BMCBI 2006»
14 years 10 months ago
In search of functional association from time-series microarray data based on the change trend and level of gene expression
Background: The increasing availability of time-series expression data opens up new possibilities to study functional linkages of genes. Present methods used to infer functional l...
Feng He, An-Ping Zeng
BMCBI
2005
124views more  BMCBI 2005»
14 years 10 months ago
Probabilistic annotation of protein sequences based on functional classifications
: One of the most evident achievements of bioinformatics is the development of methods that transfer biological knowledge from characterised proteins to uncharacterised sequences. ...
Emmanuel D. Levy, Christos A. Ouzounis, Walter R. ...
91
Voted
JCB
2002
116views more  JCB 2002»
14 years 10 months ago
A Novel Approach to Remote Homology Detection: Jumping Alignments
We describe a new algorithm for protein classi cation and the detection of remote homologs. The rationale is to exploit both vertical and horizontal information of a multiple alig...
Rainer Spang, Marc Rehmsmeier, Jens Stoye