Motivation: Mapping of remote evolutionary links is a classic computational problem of much interest. Relating protein families allows for functional and structural inference on u...
— This paper provides a broad overview of logical and black box approaches to fuzzy and rough hybridization. The logical approaches include theoretical, supervised learning, feat...
This paper presents a genetic algorithm (GA) for Kmeans clustering. Instead of the widely applied stringof-group-numbers encoding, we encode the prototypes of the clusters into th...
Abstract— In previous work, we have shown how an evolutionary algorithm with a clustered population can be used to concurrently discover multiple regulatory motifs present within...
Background: Proteins show a great variety of 3D conformations, which can be used to infer their evolutionary relationship and to classify them into more general groups; therefore ...